Welcome to the San Mateo Pipeline Pilot User Forum
This forum will begin at 9:30 am on Wednesday, October 26th at the conveniently located San Mateo Marriott. Join us and hear from BIOVIA Pipeline Pilot experts and current customers that will highlight core capabilities, advanced topics, tips and tricks, and customer case studies all designed to help you become more proficient with Pipeline Pilot. Check out the agenda below
|9:00 AM||Door Opens|
Welcome & Introductions
Matt Hahn, BIOVIA
Matt Hahn, Co-Founder of SciTegic, the company that brought you Pipeline Pilot, discusses BIOVIA’s plans for the future of Pipeline Pilot including updates for ScienceCloud, the Next Generation Web-Client and more.
Modeling LogD – Simulated Prospective Predictivity
Johannes H. Voigt, Gilead Sciences
LogD – the log of the partition coefficient between octanol/water of a compound at a given pH – is one of the most widely used physicochemical molecular properties. It is a measure of lipophilicity and can be used to predict or correlate a broad range a attributes such as solubitlity, protein binding, increased probability of polypharmacology and drug likeliness. Accurately predicted LogD values are crucial for drug design. We present a comparison of several approaches to model LogD using a large set of experimental LogD data generated at Gilead.
Chemistry Collection Updates
Moises Hassan, BIOVIA
Several enhancements have been made for the Pipeline Pilot Chemistry Collection in release versions 2016 and 2017, including updates for Homology groups and higher-order stereochemistry, HELM (XHELM support, and more.
What's New in Biology/Imaging
Tim Moran, BIOVIA
This talk will new features and capabilities in the Biology and Imaging Collections which include support of multi-national sequencing efforts and Life Science Imaging applications in machine learning.
Document Search & Analysis
Jannise Buckley, BIOVIA
Use Pipeline Pilot for all of your content, search and analysis needs with updates featuring improved ChemMining capabilities, Text Analytics, Document Search and the Thomson Reuters Cortellis Collection
What’s New in Statistics and Modeling (Big Data)
Dana Honeycutt, BIOVIA - Principal Scientist, Statistics and Data Modeling
We’ll discuss Hadoop I/O integration and enhanced scalability of native Pipeline Pilot models, including in-memory model support. We'll also cover variable (feature) importance for predictive models. We'll briefly cover tips for data preparation and cleaning.
Matt Hahn and Jannise Buckley, BIOVIA
The floor is open for you to tell us about your “Pet Peeves”, i.e. those little things that crop up from time to time that you wished would work differently, but usually not in a way that would make you file a support ticket. This session that will allow you to provide us with feedback on what you'd like to see changed in Pipeline Pilot.
Tips & Tricks
Fred Coughlin, BIOVIA
This session will cover tips and tricks for users on the newest version of Pipeline Pilot. Working with customers, we've built up a vast knowledge of problems that users have encountered and how to address those problems.
Protocol Building Competition with Matt Hahn
Matt Hahn, BIOVIA
We bring back an old Pipeline Pilot User Group tradition where Matt Hahn goes head to head with attendees in a protocol building competition to see who’s the Pipeline Pilot master
These events are free-to-attend and include lunch. Space is limited, so register early.
Further information will be made available as we approach the event. In the meantime, please feel free contact Elizabeth Eldredge (firstname.lastname@example.org) with any questions.