Features |
DS Standalone Visualizer |
DS Visualizer Client |
DS Visualizer (freeware) |
| Supported on Windows Vista , 2000, XP and Red Hat Linux WS 3.0, 4.0 |
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| 3D Graphic Window with associated Hierarchy View and Data Table View |
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| Sequence Window |
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| Table Browser Window |
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| 3D-Structure Editor |
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| Sequence Editor |
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| Sequence Annotation Viewer |
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| Secondary Structure Prediction |
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| RMSD Calculations |
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| Superimpose structures ( Perform rigid superimpositions of molecules by a variety of methods ) |
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| Files Explorer View |
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| Short-cut keys and toolbars customization |
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| Supports a wide variety of Sequence and Structure file formats |
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| ActiveX Control* |
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| Output high quality graphics for use in posters and presentations |
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| Perl Scripting |
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| Charting Window ( Create Heat Maps, Line Plots, Point Plots, Histograms, Ramachandran and Contact Plots ) |
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| Dendrogram toolbar |
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| Fragment Builder ( Build 3D molecules in the Graphics View from existing fragments, and define new fragments ) |
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| 3D Pointers and Labels ( Mark, label, and add objects to a given point in 3D coordinate space ) |
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| Modify conformations ( Modify molecular geometries by changing atomic coordinates and dihedral angles, or by performing energy minimizations with the Dreiding forcefield ) |
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| Reflection Data Viewer ( M anipulate X-ray structure factor amplitudes and the associated data, such as test flags for cross-validation, measurement errors, and Hendrickson-Lattman coefficients ) |
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Protein Reports and Utilities
( Interrogate and manipulate protein structures: renumber a sequence; generate protein reports and hydrophobicity plots; split a structure; clean protein structures; and define a nonstandard amino acid template ) |
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| Binding Site Tools ( Calculate, edit, partition, define, and display binding sites on receptors ) |
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| Binding Site Analysis ( Characterize and compare ligand binding sites within proteins ). |
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| Edit and Cluster Pharmacophores ( Selectively display, cluster, and edit pharmacophore query features ) |
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| Constraints Tools (Define constraints on atoms in your structure prior to running CHARMm simulations) |
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| Integration with Pipeline Pilot |
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| Run Discovery Studio Science on a local user machine |
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| Graphical Interface to access Discovery Studio Science, Protocols, and Tools |
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* DS Visualizer ActiveX Control is an independent product and is available as a separate download with the free DS Visualizer. It does not require the installation of DS Visualizer Client or DS Standalone Visualizer.