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Discovery Studio Visualizer 2.0

Discovery Studio Visualizer
Product Comparison Table

 

x= available feature

Features

DS Standalone Visualizer

DS Visualizer Client

DS Visualizer (freeware)

Supported on Windows Vista , 2000, XP and Red Hat Linux WS 3.0, 4.0
x
x
x
3D Graphic Window with associated Hierarchy View and Data Table View
x
x
x
Sequence Window
x
x
x
Table Browser Window
x
x
x
3D-Structure Editor
x
x
x
Sequence Editor
x
x
x
Sequence Annotation Viewer
x
x
x
Secondary Structure Prediction
x
x
x
RMSD Calculations
x
x
x
Superimpose structures ( Perform rigid superimpositions of molecules by a variety of methods )
x
x
x
Files Explorer View
x
x
x
Short-cut keys and toolbars customization
x
x
x
Supports a wide variety of Sequence and Structure file formats
x
x
x
ActiveX Control*
x
x
x
Output high quality graphics for use in posters and presentations
x
x
x
Perl Scripting
x
x
x
Charting Window ( Create Heat Maps, Line Plots, Point Plots, Histograms, Ramachandran and Contact Plots )
x
x
-
Dendrogram toolbar
x
x
-
Fragment Builder ( Build 3D molecules in the Graphics View from existing fragments, and define new fragments )
x
x
-
3D Pointers and Labels ( Mark, label, and add objects to a given point in 3D coordinate space )
x
x
-
Modify conformations ( Modify molecular geometries by changing atomic coordinates and dihedral angles, or by performing energy minimizations with the Dreiding forcefield )
x
x
-
Reflection Data Viewer ( M anipulate X-ray structure factor amplitudes and the associated data, such as test flags for cross-validation, measurement errors, and Hendrickson-Lattman coefficients )
x
x
-
Protein Reports and Utilities
( Interrogate and manipulate protein structures: renumber a sequence; generate protein reports and hydrophobicity plots; split a structure; clean protein structures; and define a nonstandard amino acid template )
x
x
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Binding Site Tools ( Calculate, edit, partition, define, and display binding sites on receptors )
x
x
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Binding Site Analysis ( Characterize and compare ligand binding sites within proteins ).
x
x
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Edit and Cluster Pharmacophores ( Selectively display, cluster, and edit pharmacophore query features )
x
x
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Constraints Tools (Define constraints on atoms in your structure prior to running CHARMm simulations)
x
x
-
Integration with Pipeline Pilot
x
x
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Run Discovery Studio Science on a local user machine
x
-
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Graphical Interface to access Discovery Studio Science, Protocols, and Tools
x
x
-

* DS Visualizer ActiveX Control is an independent product and is available as a separate download with the free DS Visualizer. It does not require the installation of DS Visualizer Client or DS Standalone Visualizer.